Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
srpk1SRSF protein kinase 1. (621 aa)    
Predicted Functional Partners:
LOC108254807
SRSF protein kinase 1-like isoform X1.
  
  
 
0.901
LOC108278759
Serine/arginine-rich splicing factor 1B.
    
 0.866
LOC108278234
Serine/arginine-rich splicing factor 1A.
    
 0.866
srsf2
Serine/arginine-rich Splicing factor 2.
   
 0.858
srsf5
Serine/arginine-rich splicing factor 5.
    
 0.837
LOC108276344-2
Serine/arginine-rich splicing factor 6-like isoform X2.
    
 0.837
srsf9
Serine/arginine-rich splicing factor 9.
    
 0.832
srsf3
Serine/arginine-rich splicing factor 3.
    
 0.794
LOC108280551
Serine/arginine-rich splicing factor 7-like isoform X2.
    
 0.708
srsf7
Serine/arginine-rich splicing factor 7.
    
 0.708
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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