Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kpna5Importin subunit alpha; Belongs to the importin alpha family. (540 aa)    
Predicted Functional Partners:
kpnb1
LOW QUALITY PROTEIN: importin subunit beta-1.
   
 0.923
cse1l
Exportin-2.
   
 
 0.694
nup50
Nuclear pore complex protein Nup50 isoform X1.
   
 
 0.692
rcc1
Regulator of chromosome condensation isoform X1.
   
 
 0.675
ipo5
Importin-5.
   
 
 0.665
nup98
Nuclear pore complex protein Nup98-Nup96 isoform X1.
   
 
 0.645
yars1
Tyrosine--tRNA ligase.
   
  
 0.641
rnmt
mRNA cap guanine-N7 methyltransferase.
   
   0.630
nup153
Nuclear pore complex protein Nup153 isoform X1.
   
 
 0.630
stk40
Serine/threonine-protein kinase 40.
   
  
 0.620
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.