Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108278632BUB3-interacting and GLEBS motif-containing protein ZNF207-like isoform X1. (468 aa)    
Predicted Functional Partners:
bub3
Mitotic checkpoint protein BUB3 isoform X1.
   
 
 0.941
hnrnpm
Heterogeneous nuclear ribonucleoprotein M isoform X2.
   
   0.905
sf3a2
Splicing factor 3A subunit 2.
   
 
 0.823
wdr77
Methylosome protein 50.
   
 
 0.688
LOC108256391
Serine/arginine-rich splicing factor 10-like.
   
 
 0.660
srsf3
Serine/arginine-rich splicing factor 3.
   
    0.644
ubr5
E3 ubiquitin-protein ligase UBR5 isoform X4.
   
 
 0.613
bub1
Mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1.
    
 
 0.593
ENSIPUP00000023163
annotation not available
    
 
 0.593
bub1b
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
    
 
 0.593
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.