Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSIPUP00000001215annotation not available (215 aa)    
Predicted Functional Partners:
LOC108273092
Peripheral plasma membrane protein CASK-like isoform X9; Belongs to the MAGUK family.
   
 0.745
cask
Peripheral plasma membrane protein CASK isoform X7; Belongs to the MAGUK family.
   
 0.745
LOC108272491
Caspase recruitment domain-containing protein 10-like.
 
      0.615
LOC108264858
SH3 and multiple ankyrin repeat domains protein 2-like isoform X2.
    
 0.606
LOC108276414
SH3 and multiple ankyrin repeat domains protein 1-like.
    
 0.606
shank3
SH3 and multiple ankyrin repeat domains protein 3 isoform X1.
    
 0.606
shank1
SH3 and multiple ankyrin repeat domains protein 1.
    
 0.606
LOC108279923
SH3 and multiple ankyrin repeat domains protein 3-like isoform X5.
    
 0.606
LOC108278500
Glutamate receptor ionotropic, NMDA 1-like isoform X3.
   
 0.600
grin1
Glutamate receptor ionotropic, NMDA 1 isoform X2.
   
 0.600
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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