Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
idi1Isopentenyl-diphosphate Delta-isomerase 1 isoform X1. (287 aa)    
Predicted Functional Partners:
mvd
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 
 0.999
fdps
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.994
sqle
Squalene monooxygenase.
   
  
 0.984
ggps1
Geranylgeranyl pyrophosphate synthase isoform X1; Belongs to the FPP/GGPP synthase family.
  
 
 0.979
LOC108277226
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
  
 0.978
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.958
LOC108274811
Lanosterol 14-alpha demethylase isoform X1; Belongs to the cytochrome P450 family.
  
  
 0.951
rusc1
RUN and SH3 domain-containing protein 1 isoform X3.
  
 
 0.886
fdft1
Squalene synthase isoform X2.
 
  
 0.874
mthfr
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
     
 0.869
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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