Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108263162Solute carrier family 35 member G2-like. (416 aa)    
Predicted Functional Partners:
slc35c1
GDP-fucose transporter 1 isoform X1.
      
 0.483
slc35f5
Solute carrier family 35 member F5 isoform X2.
      
 0.471
Ctdnep1
CTD nuclear envelope phosphatase 1.
      
 0.470
LOC108260181
CTD nuclear envelope phosphatase 1A.
      
 0.470
LOC108278498
Gamma-aminobutyric acid receptor subunit alpha-1-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.407
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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