Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108268935Phospholipase D3-like isoform X1. (770 aa)    
Predicted Functional Partners:
LOC108277026
Netrin receptor UNC5C-like.
      
 0.700
pld6
Mitochondrial cardiolipin hydrolase isoform X1.
     
 0.665
LOC108272725
Pericentrin-like isoform X6.
    
 
 0.574
LOC108274545
A-kinase anchor protein 9-like.
    
 
 0.574
LOC108275251
Disintegrin and metalloproteinase domain-containing protein 10-like.
      
 0.488
adam10
Disintegrin and metalloproteinase domain-containing protein 10.
      
 0.488
ndufaf6
NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X1.
      
 0.484
LOC108259491
Phosphoinositide phospholipase C.
     
 0.478
LOC108266487
Phosphoinositide phospholipase C.
     
 0.478
ENSIPUP00000001869
annotation not available
     
  0.469
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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