Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AP1S2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (144 aa)    
Predicted Functional Partners:
ap1g1
AP-1 complex subunit gamma.
    
 0.982
LOC108267338
AP-1 complex subunit gamma.
    
 0.981
ap1m1
AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.
   
 0.975
ap1m2
AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.
   
 0.975
ap1b1
AP complex subunit beta.
   
 0.972
LOC108271949
AP-1 complex subunit mu-1-like; Belongs to the adaptor complexes medium subunit family.
   
 0.969
LOC108280899
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
  
  
 
0.901
ap1s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
  
  
 
0.900
LOC108270839
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
  
  
 
0.900
cltc
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.858
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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