Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
syap1Synapse-associated protein 1 isoform X1. (355 aa)    
Predicted Functional Partners:
pin1
Peptidyl-prolyl cis-trans isomerase.
    
   0.964
heca
Headcase protein homolog isoform X1.
      
 0.707
reps2
ralBP1-associated Eps domain-containing protein 2 isoform X3.
      
 0.703
noc4l
Nucleolar complex protein 4 homolog.
      
 0.701
AP1S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
  
 0.680
LOC108270839
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
  
 0.680
gnb1l
Guanine nucleotide-binding protein subunit beta-like protein 1 isoform X1.
      
 0.646
vipas39
Spermatogenesis-defective protein 39 homolog.
   
  
 0.632
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
   0.624
pgm2l1
Glucose 1,6-bisphosphate synthase.
      
 0.615
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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