Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
morn4MORN repeat-containing protein 4 isoform X2. (146 aa)    
Predicted Functional Partners:
morn5
MORN repeat-containing protein 5 isoform X3.
      
 0.870
mfap3
Microfibril-associated glycoprotein 3.
      
 0.703
myo3a
myosin-IIIa isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.657
myo3b
myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.657
tmem184b
Transmembrane protein 184B isoform X1.
      
 0.648
pacrg
Parkin coregulated gene protein.
   
 
 0.640
commd9
COMM domain-containing protein 9.
      
 0.630
LOC108266093
Thioredoxin domain-containing protein 3 homolog; Belongs to the NDK family.
    
 
 0.612
LOC108277051
myosin-IIIb-like isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.595
wdr90
WD repeat-containing protein 90.
    
 0.590
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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