Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108271554Tumor necrosis factor receptor superfamily member 18-like isoform X1. (223 aa)    
Predicted Functional Partners:
ttll10
Inactive polyglycylase TTLL10.
      
 0.754
tnfsf11
Tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family.
    
 0.752
cd40lg
CD40 ligand; Belongs to the tumor necrosis factor family.
    
 0.644
LOC108265789
Forkhead box protein P3-like.
    
 0.641
LOC108277448
Tumor necrosis factor-like.
   
 0.539
tnf
Tumor necrosis factor.
   
 0.539
LOC108256756
Tumor necrosis factor ligand superfamily member 14-like; Belongs to the tumor necrosis factor family.
    
 0.538
LOC108258817
Tumor necrosis factor ligand superfamily member 6-like; Belongs to the tumor necrosis factor family.
    
 0.538
LOC108266092
B- and T-lymphocyte attenuator-like.
   
 0.505
LOC108259084
Uncharacterized protein LOC108259084.
   
 0.505
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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