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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108275736ATP-binding cassette sub-family G member 2-like. (638 aa)    
Predicted Functional Partners:
abcg5
ATP-binding cassette sub-family G member 5.
   
0.811
abcc2
Canalicular multispecific organic anion transporter 1.
  
0.733
abcc4
Multidrug resistance-associated protein 4 isoform X1.
  
 0.689
LOC108273058
Multidrug resistance-associated protein 1-like.
  
 0.571
abcb10
ATP-binding cassette sub-family B member 10, mitochondrial isoform X1.
  
 0.570
abcc12
Multidrug resistance-associated protein 9 isoform X1.
  
 0.565
LOC108275804
ATP-binding cassette sub-family E member 1.
      
 0.561
atp5f1a
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.544
atp5f1c
ATP synthase subunit gamma.
   
   0.521
atp5f1d
ATP synthase subunit delta, mitochondrial.
   
   0.492
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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