STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnpy4Protein canopy homolog 4 isoform X3. (238 aa)    
Predicted Functional Partners:
lrrc40
Leucine-rich repeat-containing protein 40.
    
 0.844
hsp90b1
Endoplasmin.
    
 0.747
LOC108255003
Protein canopy homolog 2-like.
      
 0.727
cnpy1
Protein canopy-1 isoform X1.
      
 0.643
acot11
Acyl-coenzyme A thioesterase 11 isoform X2.
      
 0.615
LOC108279843
Lymphoid-restricted membrane protein-like.
      
 0.611
chad
Chondroadherin.
    
  0.569
rsph1
Radial spoke head 1-like protein.
      
 0.481
LOC108268950
Cat eye syndrome critical region protein 2.
      
 0.478
unc93b1
Protein unc-93 homolog B1.
   
 
 0.464
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.