Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108271001BTB/POZ domain-containing protein 2-like isoform X1. (598 aa)    
Predicted Functional Partners:
cops3
COP9 signalosome complex subunit 3.
    
 0.868
cops2
COP9 signalosome complex subunit 2 isoform X2.
   
 0.866
cops5
COP9 signalosome complex subunit 5.
    
  0.861
cops4
COP9 signalosome complex subunit 4 isoform X2.
    
  0.832
cops8
COP9 signalosome complex subunit 8.
    
  0.828
cops6
COP9 signalosome complex subunit 6.
    
  0.817
cul3
Cullin-3 isoform X1; Belongs to the cullin family.
   
 0.805
LOC108261246
Cullin-3.
   
 0.805
LOC108280845
Cullin-3-like isoform X1; Belongs to the cullin family.
   
 0.805
gps1
COP9 signalosome complex subunit 1.
   
  0.736
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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