Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
b4galt7Beta-1,4-galactosyltransferase 7. (317 aa)    
Predicted Functional Partners:
b3galt6
Hexosyltransferase.
    
 0.977
xylt2
Xylosyltransferase 2 isoform X1.
     
 0.974
xylt1
Xylosyltransferase 1.
     
 0.961
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
   
  
 0.768
ldlrad3
Low-density lipoprotein receptor class A domain-containing protein 3 isoform X1.
    
 
 0.708
extl3
Exostosin-like 3; Belongs to the glycosyltransferase 47 family.
      
 0.705
slc35b2
Adenosine 3'-phospho 5'-phosphosulfate transporter 1.
   
  
 0.704
uxs1
UDP-glucuronic acid decarboxylase 1.
   
  
 0.687
csgalnact2
Hexosyltransferase.
      
 0.684
LOC108259923
Neuferricin; Belongs to the cytochrome b5 family.
      
 0.648
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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