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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pth2rParathyroid hormone 2 receptor; Belongs to the G-protein coupled receptor 2 family. (511 aa)    
Predicted Functional Partners:
pth2
Tuberoinfundibular peptide of 39 residues.
    
 0.989
ENSIPUP00000031118
Parathyroid hormone 1b.
     
 0.936
ENSIPUP00000018941
annotation not available
   
 0.891
LOC108274459
Parathyroid hormone-related protein-like.
    
 0.762
LOC108274596
Parathyroid hormone-related protein-like.
    
 0.762
LOC108256701
Receptor activity-modifying protein 3-like.
    
 0.587
ramp1
Receptor activity-modifying protein 1.
    
 0.524
LOC108280206
Corticoliberin-like.
    
 0.519
LOC108256093
Corticoliberin-1-like.
    
 0.519
pex7
Peroxisomal biogenesis factor 7 isoform X1.
      
 0.432
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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