Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108275742G-protein-signaling modulator 2-like. (360 aa)    
Predicted Functional Partners:
ENSIPUP00000001406
annotation not available
 
      0.892
LOC108265813
Guanine Nucleotide-binding protein G(K) subunit alpha.
   
 0.720
INSC
Protein inscuteable homolog.
    
 
 0.714
afdn
Afadin isoform X10.
    
 
 0.695
LOC108271583
Guanine nucleotide-binding protein G(T) subunit alpha-1.
   
 0.664
LOC108265815
Guanine nucleotide-binding protein G(T) subunit alpha-2-like.
   
 0.664
ENSIPUP00000025550
Guanine nucleotide-binding protein G(t) subunit alpha-3-like.
   
 0.664
LOC108271854
Guanine Nucleotide-binding protein G(i) subunit alpha-2.
   
 0.654
gnai1
Guanine nucleotide-binding protein G(I) subunit alpha-1 isoform X1.
   
 0.654
GNAO1
Guanine nucleotide-binding protein G(O) subunit alpha isoform X1.
   
 0.654
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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