Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
colColipase precursor. (113 aa)    
Predicted Functional Partners:
PNLIPRP2
Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family.
   
 0.973
lipp
Pancreatic triacylglycerol lipase.
   
 0.923
pla2g1b
Phospholipase A(2).
   
  
 0.866
cel
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
  
 0.838
eno4
Enolase 4 isoform X1.
      
 0.677
sycn
Syncollin.
   
  
 0.672
LOC108263130
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.642
pitx3
Homeobox protein.
      
 0.638
LOC108277669
Chymotrypsin-like protease CTRL-1; Belongs to the peptidase S1 family.
   
  
 0.531
LOC108274430
Chymotrypsin A-like; Belongs to the peptidase S1 family.
   
  
 0.531
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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