Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108267835Netrin-1-like. (876 aa)    
Predicted Functional Partners:
LOC108277026
Netrin receptor UNC5C-like.
    
 0.855
LOC108275206
Neogenin-like isoform X3.
    
 0.807
LOC108271025
Neogenin-like isoform X6.
    
 0.807
dcc
Netrin receptor DCC isoform X2.
    
 0.807
LOC108263852
Netrin receptor UNC5B-a-like isoform X3.
    
 0.801
LOC108259659
Immunoglobulin superfamily DCC subclass member 4-like isoform X3.
    
 0.789
unc5a
Netrin receptor UNC5A isoform X2.
    
 0.786
LOC108280204
Down syndrome cell adhesion molecule-like.
   
 0.734
dscaml1
Down syndrome cell adhesion molecule-like protein 1.
   
 0.734
LOC108277288
Down syndrome cell adhesion molecule homolog.
   
 0.734
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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