Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108269307Homeobox protein engrailed-like ceh-16. (241 aa)    
Predicted Functional Partners:
LOC108272420
Brachyury protein homolog A.
    
 0.778
LOC108265264
T-box-containing protein TBX6L-like.
   
 
 0.622
tbxt
Brachyury protein.
    
 0.582
LOC108272403
T-box-containing protein TBXT-like isoform X1.
    
 0.582
dapp1
Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide isoform X1.
      
 0.519
LOC108278541
T-box-containing protein TBX6L-like.
   
 
 0.516
pax4
Paired box protein Pax-4.
  
  
 0.499
LOC108257557
Hepatocyte nuclear factor 3-beta-like.
    
 0.488
foxa2
Hepatocyte nuclear factor 3-beta.
    
 0.488
LOC108279289
Nodal homolog 2-A-like.
      
 0.483
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.