Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108267836Active breakpoint cluster region-related protein-like. (820 aa)    
Predicted Functional Partners:
afdn
Afadin isoform X10.
    
 
 0.643
LOC108274707
Unconventional myosin-IXa-like isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.616
myo9a
Unconventional myosin-IXa isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.616
LOC108267238
Unconventional myosin-IXb-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.616
myo9b
Unconventional myosin-IXb isoform X5; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.616
LOC108256494
Growth factor receptor-bound protein 2.
    
 0.605
grb2
Growth factor receptor-bound protein 2 isoform X1.
    
 0.605
abl2
Tyrosine-protein kinase.
    
 0.555
abl1
Tyrosine-protein kinase.
    
 0.555
ercc3
TFIIH basal transcription factor complex helicase XPB subunit.
    
   0.547
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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