Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kctd17BTB/POZ domain-containing protein KCTD17 isoform X7. (291 aa)    
Predicted Functional Partners:
kctd2
BTB/POZ domain-containing protein KCTD2.
    
 
 0.721
cul3
Cullin-3 isoform X1; Belongs to the cullin family.
    
 0.705
LOC108261246
Cullin-3.
    
 0.705
LOC108280845
Cullin-3-like isoform X1; Belongs to the cullin family.
    
 0.705
tchp
Trichoplein keratin filament-binding protein isoform X1.
    
 
 0.670
kctd9
BTB/POZ domain-containing protein KCTD9.
    
 
 0.658
dmc1
Meiotic recombination protein dmc1/lim15-like protein; Belongs to the RecA family.
    
   0.628
usp8
Ubiquitin carboxyl-terminal hydrolase 8.
      
 0.612
plekhg2
Pleckstrin homology domain-containing family G member 2 isoform X1.
      
 0.552
ARRDC1
Arrestin domain-containing protein 1-like.
    
   0.510
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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