Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rimklaN-acetylaspartylglutamate synthase A. (397 aa)    
Predicted Functional Partners:
nat8l
N-acetylaspartate synthetase.
     
 0.967
aspa
Aspartoacylase.
     
 0.926
cs
Citrate synthase; Belongs to the citrate synthase family.
    
 0.874
idh3a
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.862
idh3b
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.855
LOC108275983
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.855
LOC108276129
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.855
mdh2
Malate dehydrogenase.
    
 0.842
LOC108265558
2-oxoglutarate dehydrogenase, mitochondrial isoform X1.
   
 0.839
ogdh
2-oxoglutarate dehydrogenase, mitochondrial isoform X1.
   
 0.839
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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