Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
fat2Protocadherin Fat 2. (4334 aa)    
Predicted Functional Partners:
fjx1
Four-jointed box protein 1.
   
 
 0.800
LOC108271943
Arginine-glutamic acid dipeptide repeats protein-like isoform X1.
    
 0.703
aanat
Serotonin N-acetyltransferase.
      
 0.664
rere
Arginine-glutamic acid dipeptide repeats protein isoform X4.
    
 0.654
LOC108264285
Atrophin-1-like isoform X1.
    
 0.644
lats2
Serine/threonine-protein kinase LATS2.
    
 
 0.643
yap1
Transcriptional coactivator YAP1 isoform X1.
   
 
 0.626
LOC108260713
Melatonin receptor type 1A-A-like; Belongs to the G-protein coupled receptor 1 family.
     
 0.614
tenm1
Teneurin-1.
      
 0.614
scd5
stearoyl-CoA desaturase 5 isoform X1; Belongs to the fatty acid desaturase type 1 family.
      
 0.614
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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