STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGAP2arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2. (1027 aa)    
Predicted Functional Partners:
LOC108263852
Netrin receptor UNC5B-a-like isoform X3.
    
 0.635
LOC108266469
Protein TANC1-like isoform X2.
    
 
 0.631
LOC108276979
Interleukin-11 receptor subunit alpha-like isoform X1.
     
  0.536
tanc2
Protein TANC2 isoform X3.
    
 
 0.419
LOC108274047
Protein TANC2-like isoform X1.
    
 
 0.419
rpl31
60S ribosomal protein L31; Belongs to the eukaryotic ribosomal protein eL31 family.
      
 0.406
chst10
Carbohydrate sulfotransferase.
   
  
 0.403
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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