Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
LOC108277463Lysosomal thioesterase PPT2-like. (291 aa)    
Predicted Functional Partners:
ppt1
Palmitoyl-protein thioesterase 1 isoform X1.
     
0.927
mecr
trans-2-enoyl-CoA reductase, mitochondrial isoform X1.
   
 
 0.905
ppt2
Lysosomal thioesterase PPT2-A.
  
  
 
0.902
LOC108278856
long-chain-fatty-acid--CoA ligase 6-like isoform X1.
   
 
 0.686
LOC108280780
long-chain-fatty-acid--CoA ligase 3-like.
   
 
 0.685
acsl4
Long-chain-fatty-acid--CoA ligase 4.
   
 
 0.678
zdhhc7
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.670
LOC108274927
long-chain-fatty-acid--CoA ligase 1-like.
   
 
 0.663
acsl1
long-chain-fatty-acid--CoA ligase 1 isoform X1.
   
 
 0.663
acsl5
long-chain-fatty-acid--CoA ligase 5.
   
 
 0.656
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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