Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
akap6A-kinase anchor protein 6. (2081 aa)    
Predicted Functional Partners:
rabac1
PRA1 family protein.
      
 0.855
LOC108275659
Rap guanine nucleotide exchange factor 3-like isoform X1.
    
 
 0.781
LOC108278245
A-kinase anchor protein 1, mitochondrial-like.
      
 0.761
akap7
A-kinase anchor protein 7 isoform X2.
      
 0.665
ENSIPUP00000021023
A kinase (PRKA) anchor protein 7.
      
 0.665
nop16
Nucleolar protein 16.
      
 0.629
LOC108274254
Putative thiamine transporter SLC35F3 isoform X2.
      
 0.615
UNC79
Protein unc-79 homolog isoform X3.
      
 0.614
tmem121b
Cat eye syndrome critical region protein 6.
      
 0.614
akap10
A-kinase anchor protein 10, mitochondrial isoform X2.
      
 0.582
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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