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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108270949Protein unc-13 homolog A-like isoform X6. (1558 aa)    
Predicted Functional Partners:
LOC108257307
Regulating synaptic membrane exocytosis protein 2-like.
    
 0.994
LOC108257276
Regulating synaptic membrane exocytosis protein 2-like.
    
0.994
RIMS2
Regulating synaptic membrane exocytosis protein 2-like.
    
0.994
rims3
Regulating Synaptic membrane exocytosis protein 3.
    
 0.667
LOC108259070
Regulating synaptic membrane exocytosis protein 1-like isoform X7.
    
 0.667
rims1
Regulating synaptic membrane exocytosis protein 1 isoform X2.
    
 0.667
LOC108273092
Peripheral plasma membrane protein CASK-like isoform X9; Belongs to the MAGUK family.
   
 
 0.639
cask
Peripheral plasma membrane protein CASK isoform X7; Belongs to the MAGUK family.
   
 
 0.639
syt1
Synaptotagmin-1 isoform X1.
   
 
 0.635
SYT2
Synaptotagmin-2-like.
   
 
 0.635
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.