Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
clppATP-dependent Clp protease proteolytic subunit. (305 aa)    
Predicted Functional Partners:
LOC108275190
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial.
 
 0.996
clpx
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1.
 
 0.996
tfam
Transcription factor A, mitochondrial.
    
 0.923
ssbp1
Single-stranded DNA-binding protein, mitochondrial.
   
 0.923
hspd1
60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.
 
 0.919
hspe1
10 kDa heat shock protein, mitochondrial; Belongs to the GroES chaperonin family.
 
 
 0.911
LOC108273913
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
   
 0.905
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 0.893
hspa9
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
  
 0.893
ndufs3
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial isoform X1; Belongs to the complex I 30 kDa subunit family.
   
 0.888
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.