Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
taf2Transcription initiation factor TFIID subunit 2. (1138 aa)    
Predicted Functional Partners:
taf10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.999
LOC108278840
Transcription initiation factor TFIID subunit 9-like isoform X1.
    
 0.999
taf11
Transcription initiation factor TFIID subunit 11 isoform X2.
    
 0.999
taf12
Transcription initiation factor TFIID subunit 12 isoform X1.
    
 0.999
taf1
Transcription initiation factor TFIID subunit.
   
 0.999
taf7l
Transcription initiation factor TFIID subunit 7-like isoform X1.
    
 0.999
taf13
Transcription initiation factor TFIID subunit 13.
    
 0.999
taf8
Transcription initiation factor TFIID subunit 8.
   
 0.999
taf6
Transcription initiation factor TFIID subunit 6.
    
 0.999
taf3
Transcription initiation factor TFIID subunit 3.
    
 0.996
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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