Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
kaznKazrin. (472 aa)    
Predicted Functional Partners:
LOC108255121
Kazrin-like.
  
  
 
0.903
LOC108273092
Peripheral plasma membrane protein CASK-like isoform X9; Belongs to the MAGUK family.
    
 0.770
cask
Peripheral plasma membrane protein CASK isoform X7; Belongs to the MAGUK family.
    
 0.770
LOC108257307
Regulating synaptic membrane exocytosis protein 2-like.
    
 0.760
LOC108257276
Regulating synaptic membrane exocytosis protein 2-like.
    
 0.760
RIMS2
Regulating synaptic membrane exocytosis protein 2-like.
    
 0.760
ppl
Periplakin.
    
 0.644
evpl
Envoplakin.
    
 0.629
LOC108272806
Envoplakin-like.
    
 0.629
atg5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
   0.495
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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