Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC108270951Unconventional myosin-Vb-like isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (695 aa)    
Predicted Functional Partners:
rab11a
RAB11A, member RAS oncogene family.
   
 0.789
exoc4
Exocyst complex component 4.
   
 0.761
rab25
RAB25, member RAS oncogene family.
   
 0.753
LOC108280567
Ras-related protein Rab-11B isoform X2.
   
 0.753
rab11b
RAB11B, member RAS oncogene family.
   
 0.753
mlph
Melanophilin isoform X1.
    
 0.727
LOC108265531
Rab11 family-interacting protein 1-like isoform X1.
   
 0.714
rab11fip2
Rab11 family-interacting protein 2.
   
 0.714
LOC108276639
Rab11 family-interacting protein 1-like.
   
 0.714
arpc2
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
    
  0.677
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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