Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cc2d2aCoiled-coil and C2 domain-containing protein 2A isoform X3. (1666 aa)    
Predicted Functional Partners:
ahi1
Jouberin isoform X3.
    
 0.988
tmem67
Meckelin.
   
 
 0.987
b9d1
B9 domain-containing protein 1.
    
 0.986
mks1
Meckel syndrome type 1 protein.
    
 0.982
b9d2
B9 domain-containing protein 2.
    
 0.979
LOC108268819
Transmembrane protein 216-like isoform X2.
     
 0.972
tctn1
Tectonic-1 isoform X1.
    
 0.966
tmem231
Transmembrane protein 231.
    
 
 0.955
LOC108274004
Tectonic-3-like isoform X1.
    
 0.953
rpgrip1l
Protein fantom.
   
  
 0.926
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.