Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108269025Proton-coupled amino acid transporter 1-like isoform X1. (463 aa)    
Predicted Functional Partners:
ENSIPUP00000003996
Syntaxin-binding protein 5.
   
  
 0.711
slc38a9
Putative sodium-coupled neutral amino acid transporter 9.
   
 
 0.640
iqca1
IQ and AAA domain-containing protein 1.
   
  
 0.633
LOC108265810
IQ and AAA domain-containing protein 1-like isoform X1.
   
  
 0.633
slc6a20
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.616
LOC108263252
Coiled-coil domain-containing protein 149-like isoform X2.
      
 0.615
LOC108268063
Coiled-coil domain-containing protein 149-A-like isoform X3.
      
 0.615
fat1
Protocadherin Fat 1 isoform X1.
      
 0.599
ppp6c
Serine/threonine-protein phosphatase.
    
   0.591
pikfyve
1-phosphatidylinositol 3-phosphate 5-kinase isoform X5.
    
 
 0.581
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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