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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108274109Steroidogenic acute regulatory protein, mitochondrial-like. (328 aa)    
Predicted Functional Partners:
stard3
stAR-related lipid transfer protein 3.
     
0.744
stard3nl
MLN64 N-terminal domain homolog.
     
 0.718
stard4
stAR-related lipid transfer protein 4 isoform X1.
     
 0.617
FDX1
Adrenodoxin-like.
   
 
 0.580
LOC108259761
Adrenodoxin-like protein, mitochondrial.
   
 
 0.580
fdx2
Adrenodoxin-like protein, mitochondrial.
   
 
 0.580
fads6
Fatty acid desaturase 6.
     
 0.566
fdxr
NADPH:adrenodoxin oxidoreductase, mitochondrial.
     
 0.566
stard7
stAR-related lipid transfer protein 7, mitochondrial.
      
 0.475
tspo
Translocator protein isoform X1.
      
 0.472
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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