Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
rnf17RING finger protein 17 isoform X2. (1406 aa)    
Predicted Functional Partners:
cwc15
Spliceosome-associated protein CWC15 homolog.
      
 0.915
ENSIPUP00000004081
annotation not available
   
  
 0.898
LOC108264774
Lysyl oxidase homolog 1-like.
    
 
 0.835
tdrd9
Putative ATP-dependent RNA helicase TDRD9.
   
 0.732
pxmp4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.719
tdrd5
Tudor domain-containing protein 5 isoform X1.
   
  
 0.710
wbp2
WW domain-binding protein 2.
      
 0.707
stxbp6
Syntaxin-binding protein 6 isoform X3.
   
  
 0.701
eef1akmt1
EEF1A lysine methyltransferase 1; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
      
 0.668
plcl2
Phosphoinositide phospholipase C.
      
 0.665
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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