Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
foxp1Forkhead box protein P1 isoform X1. (715 aa)    
Predicted Functional Partners:
frmd4b
FERM domain-containing protein 4B isoform X2.
      
 0.672
mdfic
myoD family inhibitor domain-containing protein.
      
 0.636
aanat
Serotonin N-acetyltransferase.
      
 0.626
mitf
Microphthalmia-associated transcription factor isoform X1.
      
 0.602
prdm14
PR domain zinc finger protein 14.
    
 0.559
wdr5
WD repeat-containing protein 5.
      
 0.559
ENSIPUP00000036008
annotation not available
    
 
 0.547
runx2
Runt-related transcription factor.
    
 0.536
runx1
Runt-related transcription factor.
    
 0.536
LOC108258149
Runt-related transcription factor.
    
 0.536
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.