Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
abl2Tyrosine-protein kinase. (1165 aa)    
Predicted Functional Partners:
crkl
Crk-like protein.
    
 0.971
crk
Adapter molecule crk.
    
 0.971
CRK
Adapter molecule crk-like.
    
0.971
atm
Non-specific serine/threonine protein kinase.
    
 0.934
abi1
Abl interactor 1 isoform X1.
    
 0.911
LOC108267643
Abl interactor 1-like isoform X1.
    
 0.911
abl1
Tyrosine-protein kinase.
  
  
 
0.903
nckap1
Nck-associated protein 1 isoform X3.
    
 0.889
dok1
Docking protein 1.
    
 0.851
LOC108273397
Formin-like protein 5.
    
 0.822
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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