Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC108266235Dynein assembly factor 1, axonemal. (593 aa)    
Predicted Functional Partners:
dnai1
Dynein intermediate chain 1, axonemal isoform X1.
  
 0.712
zmynd10
Zinc finger MYND domain-containing protein 10.
  
 
 0.692
dnai2
Dynein intermediate chain 2, axonemal.
    
 0.644
rsph9
Radial spoke head protein 9 homolog.
   
 0.629
ccdc40
Coiled-coil domain-containing protein 40.
   
 
 0.604
ccdc39
Coiled-coil domain-containing protein 39.
    
 0.572
LOC108266093
Thioredoxin domain-containing protein 3 homolog; Belongs to the NDK family.
    
 0.559
dnaaf3
Dynein assembly factor 3, axonemal.
      
 0.546
ccdc103
Coiled-coil domain-containing protein 103.
   
  
 0.538
LOC108280282
Protein tilB homolog.
    
 0.508
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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