STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cog1Conserved oligomeric Golgi complex subunit 1 isoform X1. (970 aa)    
Predicted Functional Partners:
cog7
Conserved oligomeric Golgi complex subunit 7.
   
 0.999
cog8
Conserved oligomeric Golgi complex subunit 8.
   
 0.999
cog5
Conserved oligomeric Golgi complex subunit 5.
   
 0.999
cog3
Conserved oligomeric Golgi complex subunit 3.
   
 0.999
cog2
Conserved oligomeric Golgi complex subunit 2.
   
 0.999
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.999
gfod2-2
Glucose-fructose oxidoreductase domain-containing protein 2 isoform X2.
   
 0.992
LOC108271360
Conserved oligomeric Golgi complex subunit 4-like.
   
 0.988
vti1a
Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.
   
 
 0.961
vps51
Vacuolar protein sorting-associated protein 51 homolog.
   
 
 0.936
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.