Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tmbim6Putative Bax inhibitor 1; Belongs to the BI1 family. (237 aa)    
Predicted Functional Partners:
tmem53
Transmembrane protein 53.
      
 0.890
LOC108273997
Desumoylating isopeptidase 1-like.
    
   0.878
LOC108273026
Desumoylating isopeptidase 1-like isoform X1.
    
   0.878
LOC108258586
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.802
LOC108269999
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.802
ghitm
Growth hormone-inducible Transmembrane protein; Belongs to the BI1 family.
   
  
 0.759
pcmt1
Protein-L-isoaspartate O-methyltransferase.
      
 0.749
hsp90b1
Endoplasmin.
   
  
 0.656
c10h6orf120
UPF0669 protein C6orf120 homolog.
      
 0.641
pdcd5
Programmed cell death protein 5 isoform X1.
   
  
 0.623
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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