Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
c1h8orf88Uncharacterized protein C8orf88 homolog isoform X1. (136 aa)    
Predicted Functional Partners:
snd1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
    
 
 0.743
dnd1
Dead end protein homolog 1.
      
 0.645
LOC108260559
Tudor domain-containing protein 7A-like.
    
 
 0.589
LOC108275341
Regulator of G-protein signaling 14-like.
      
 0.485
LOC108274316
28 kDa heat- and acid-stable phosphoprotein-like.
      
 0.484
pdap1
28 kDa heat- and acid-stable phosphoprotein.
      
 0.484
dtymk
Thymidylate kinase.
      
 0.479
tdrd7
Tudor domain-containing protein 7 isoform X2.
    
 
 0.436
ngdn
Neuroguidin.
      
 0.430
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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