Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cfap300Uncharacterized protein c11orf70-like protein. (315 aa)    
Predicted Functional Partners:
cfap298
UPF0769 protein C21orf59 homolog.
    
 
 0.796
pih1d3
Protein PIH1D3 isoform X2.
    
 
 0.749
dnaaf5
Dynein assembly factor 5, axonemal.
    
 
 0.710
LOC108280282
Protein tilB homolog.
    
 0.707
dnai1
Dynein intermediate chain 1, axonemal isoform X1.
    
 
 0.701
lrrc56
Leucine-rich repeat-containing protein 56 isoform X1.
    
 0.696
ccdc151
Coiled-coil domain-containing protein 151 isoform X1.
    
 0.680
cfap52
Cilia- and flagella-associated protein 52.
    
 0.680
pih1d2
PIH1 domain-containing protein 2 isoform X1.
   
 
 0.664
ttc12
Tetratricopeptide repeat protein 12 isoform X1.
    
 
 0.656
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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