Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ankrd49Ankyrin repeat domain-containing protein 49. (240 aa)    
Predicted Functional Partners:
fkbpl
FK506-binding protein-like isoform X2.
    
 0.980
trit1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
   
  
 0.712
slc25a19
Mitochondrial Thiamine pyrophosphate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.649
hif1an
Hypoxia-inducible factor 1-alpha inhibitor.
    
   0.642
aasdhppt
L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
    
 
 0.639
mrpl10
39S ribosomal protein L10, mitochondrial.
      
 0.629
LOC108273445
Casein kinase I-like isoform X2; Belongs to the protein kinase superfamily.
    
 0.607
LOC108274016
Casein kinase I isoform delta-B; Belongs to the protein kinase superfamily.
    
 0.607
LOC108259482
Casein kinase I isoform X2; Belongs to the protein kinase superfamily.
    
 0.607
foxred1
FAD-dependent oxidoreductase domain-containing protein 1.
      
 0.582
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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