Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108277762Prostaglandin G/H synthase 2-like. (606 aa)    
Predicted Functional Partners:
LOC108255976
Prostaglandin G/H synthase 1-like isoform X1.
  
 
0.973
ptges
Prostaglandin E synthase.
     
 0.959
ptges2
Prostaglandin E synthase 2.
     
 0.943
ptges3
Prostaglandin E synthase 3.
     
 0.935
prxl2b
Prostamide/prostaglandin F synthase isoform X1.
     
 0.925
ptgis
Prostacyclin synthase; Belongs to the cytochrome P450 family.
    
 0.925
tbxas1
thromboxane-A synthase isoform X1; Belongs to the cytochrome P450 family.
     
 0.915
PTGIS
Prostacyclin synthase-like; Belongs to the cytochrome P450 family.
    
 0.914
LOC108267745
Arachidonate 12-lipoxygenase, 12S-type-like.
    
 0.913
LOC108267744
Arachidonate 12-lipoxygenase, 12S-type-like isoform X1.
    
 0.913
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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