Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSIPUP00000001685Prokineticin 2. (107 aa)    
Predicted Functional Partners:
LOC108263766
Prokineticin receptor 1-like; Belongs to the G-protein coupled receptor 1 family.
  
 
 0.860
LOC108258526
Prokineticin receptor 2-like; Belongs to the G-protein coupled receptor 1 family.
  
 
 0.858
LOC108267265
G-protein coupled receptor 54.
    
 0.657
kiss1r
kiSS-1 receptor.
    
 0.587
fezf1
Fez family zinc finger protein 1.
      
 0.584
LOC108262899
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.559
trh
Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.
     
 0.554
ANOS1
Anosmin-1-like isoform X2.
      
 0.550
anos1
Anosmin-1.
      
 0.550
LOC108279450
pro-MCH 2-like.
     
 0.545
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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