Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108260937Cytochrome P450 4V2-like; Belongs to the cytochrome P450 family. (509 aa)    
Predicted Functional Partners:
LOC108269273
Cytochrome b5 reductase 4.
    
 
 0.668
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.640
sqle
Squalene monooxygenase.
  
 0.620
LOC108263488
Cytochrome P450 11B, mitochondrial-like; Belongs to the cytochrome P450 family.
  
 
 
0.591
aasdh
acyl-CoA synthetase family member 4 isoform X1.
  
 0.590
sc5d
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.573
wdr37
WD repeat-containing protein 37.
    
 0.572
LOC108275150
Phosphoethanolamine N-methyltransferase 3-like isoform X1.
   
 0.559
hsd17b7
3-keto-steroid reductase.
   
 
 0.538
LOC108272069
Cytochrome b5; Belongs to the cytochrome b5 family.
   
 
 0.537
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.