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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108266249Uncharacterized methyltransferase-like C25B8.10. (271 aa)    
Predicted Functional Partners:
mrps5
28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
    
 0.660
trmt112
Multifunctional methyltransferase subunit TRM112-like protein.
   
 0.641
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.632
bysl
Bystin.
   
 0.568
tsr1
pre-rRNA-processing protein TSR1 homolog.
   
 0.547
LOC108268871
Malate synthase-like.
   
  
 0.525
rps6
40S ribosomal protein S6; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.524
rps11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
  0.519
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.518
rps8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.515
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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