Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fnbp1lFormin-binding protein 1-like isoform X1. (551 aa)    
Predicted Functional Partners:
cdc42
Cell division control protein 42-like protein.
    
 0.819
LOC108276251
Cell division control protein 42 homolog.
    
 0.819
was
Wiskott-Aldrich syndrome protein.
   
 0.776
LOC108265595
wiskott-Aldrich syndrome protein-like isoform X1.
   
 0.776
LOC108280080
Neural Wiskott-Aldrich syndrome protein-like.
   
 0.776
LOC108275301
Neural Wiskott-Aldrich syndrome protein-like isoform X1.
   
 0.776
nckipsd
NCK-interacting protein with SH3 domain.
    
 
 0.754
WIPF1
WAS/WASL-interacting protein family member 1-like.
   
 0.735
LOC108267026
WAS/WASL-interacting protein family member 1-like isoform X1.
   
 0.735
itsn2
LOW QUALITY PROTEIN: intersectin-2.
   
 0.716
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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