Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
g3bp1Ras GTPase-activating protein-binding protein 1 isoform X2. (475 aa)    
Predicted Functional Partners:
caprin1
Caprin-1 isoform X2.
   
 
 0.932
usp10
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.912
atxn2
Ataxin-2 isoform X8.
   
 
 0.848
atxn2l
Ataxin-2-like protein isoform X1.
   
 
 0.839
fmr1
Fragile X mental retardation protein 1 isoform X1.
   
 
 0.801
eif3b
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.774
LOC108265821
YTH domain-containing family protein 1-like isoform X2.
   
 
 0.764
nufip2
Nuclear fragile X mental retardation-interacting protein 2 isoform X1.
   
 
 0.749
pum1
Pumilio homolog 1 isoform X1.
   
 
 0.749
LOC108276557
Nuclear fragile X mental retardation-interacting protein 2-like.
   
 
 0.749
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (12%) [HD]